Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDGFAP04085 AP001330.3-201ENST00000520123 633 ntBASIC21.31■■□□□ 1
PDGFAP04085 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFAP04085 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFAP04085 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDGFAP04085 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.3■■□□□ 1
PDGFAP04085 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFAP04085 AC020928.2-201ENST00000588717 2197 ntBASIC21.3■■□□□ 1
PDGFAP04085 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFAP04085 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFAP04085 AC004448.1-201ENST00000458332 883 ntBASIC21.3■■□□□ 1
PDGFAP04085 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.3■■□□□ 1
PDGFAP04085 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PDGFAP04085 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.3■■□□□ 1
PDGFAP04085 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.3■■□□□ 1
PDGFAP04085 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFAP04085 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFAP04085 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDGFAP04085 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PDGFAP04085 AC097639.1-201ENST00000565519 1891 ntBASIC21.29■■□□□ 1
PDGFAP04085 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDGFAP04085 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDGFAP04085 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.29■■□□□ 1
PDGFAP04085 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDGFAP04085 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDGFAP04085 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDGFAP04085 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFAP04085 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFAP04085 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFAP04085 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFAP04085 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.28■■□□□ 1
PDGFAP04085 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFAP04085 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDGFAP04085 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.27■■□□□ 1
PDGFAP04085 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFAP04085 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.27■■□□□ 1
PDGFAP04085 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFAP04085 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFAP04085 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFAP04085 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFAP04085 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.27■■□□□ 1
PDGFAP04085 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.27■■□□□ 1
PDGFAP04085 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.27■■□□□ 1
PDGFAP04085 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.27■■□□□ 1
PDGFAP04085 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFAP04085 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFAP04085 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFAP04085 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
PDGFAP04085 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDGFAP04085 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.26■□□□□ 0.99
PDGFAP04085 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFAP04085 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.26■□□□□ 0.99
PDGFAP04085 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.26■□□□□ 0.99
PDGFAP04085 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFAP04085 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFAP04085 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.25■□□□□ 0.99
PDGFAP04085 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFAP04085 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFAP04085 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFAP04085 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.25■□□□□ 0.99
PDGFAP04085 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFAP04085 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFAP04085 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFAP04085 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDGFAP04085 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PDGFAP04085 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFAP04085 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.24■□□□□ 0.99
PDGFAP04085 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.24■□□□□ 0.99
PDGFAP04085 MIR4767-201ENST00000582827 78 ntBASIC21.24■□□□□ 0.99
PDGFAP04085 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.24■□□□□ 0.99
PDGFAP04085 MIR6821-201ENST00000617625 74 ntBASIC21.24■□□□□ 0.99
PDGFAP04085 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFAP04085 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFAP04085 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDGFAP04085 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFAP04085 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFAP04085 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFAP04085 AC005703.6-201ENST00000623265 1329 ntBASIC21.23■□□□□ 0.99
PDGFAP04085 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PDGFAP04085 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFAP04085 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 AC091305.1-201ENST00000479476 895 ntBASIC21.22■□□□□ 0.99
PDGFAP04085 DUX4L19-201ENST00000557448 1267 ntBASIC21.22■□□□□ 0.99
PDGFAP04085 SYT6-210ENST00000641643 1587 ntBASIC21.22■□□□□ 0.99
PDGFAP04085 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFAP04085 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFAP04085 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PDGFAP04085 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFAP04085 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms