Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT6AP02538 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT6AP02538 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
KRT6AP02538 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.1■■□□□ 1.13
KRT6AP02538 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
KRT6AP02538 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KRT6AP02538 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.1■■□□□ 1.13
KRT6AP02538 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.1■■□□□ 1.13
KRT6AP02538 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT6AP02538 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT6AP02538 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
KRT6AP02538 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
KRT6AP02538 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.09■■□□□ 1.13
KRT6AP02538 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT6AP02538 TSPY13P-201ENST00000338964 914 ntBASIC22.09■■□□□ 1.13
KRT6AP02538 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.09■■□□□ 1.13
KRT6AP02538 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT6AP02538 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT6AP02538 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.08■■□□□ 1.13
KRT6AP02538 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.08■■□□□ 1.13
KRT6AP02538 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT6AP02538 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KRT6AP02538 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
KRT6AP02538 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KRT6AP02538 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.12
KRT6AP02538 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KRT6AP02538 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
KRT6AP02538 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
KRT6AP02538 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.07■■□□□ 1.12
KRT6AP02538 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.07■■□□□ 1.12
KRT6AP02538 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
KRT6AP02538 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.07■■□□□ 1.12
KRT6AP02538 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT6AP02538 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KRT6AP02538 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT6AP02538 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
KRT6AP02538 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT6AP02538 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KRT6AP02538 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT6AP02538 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT6AP02538 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
KRT6AP02538 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 AC120024.1-201ENST00000562672 995 ntBASIC22.06■■□□□ 1.12
KRT6AP02538 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
KRT6AP02538 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
KRT6AP02538 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
KRT6AP02538 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRT6AP02538 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.05■■□□□ 1.12
KRT6AP02538 AC131274.2-201ENST00000580697 1507 ntBASIC22.05■■□□□ 1.12
KRT6AP02538 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
KRT6AP02538 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.04■■□□□ 1.12
KRT6AP02538 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KRT6AP02538 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.04■■□□□ 1.12
KRT6AP02538 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.04■■□□□ 1.12
KRT6AP02538 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.04■■□□□ 1.12
KRT6AP02538 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KRT6AP02538 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KRT6AP02538 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT6AP02538 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.03■■□□□ 1.12
KRT6AP02538 KRT18P24-201ENST00000344739 1156 ntBASIC22.03■■□□□ 1.12
KRT6AP02538 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
KRT6AP02538 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KRT6AP02538 AC010980.1-201ENST00000587192 1142 ntBASIC22.03■■□□□ 1.12
KRT6AP02538 THA1P-201ENST00000590384 1145 ntBASIC22.03■■□□□ 1.12
KRT6AP02538 PVT1_1.1-201ENST00000615125 194 ntBASIC22.03■■□□□ 1.12
KRT6AP02538 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.03■■□□□ 1.12
KRT6AP02538 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.03■■□□□ 1.12
KRT6AP02538 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
KRT6AP02538 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.03■■□□□ 1.12
KRT6AP02538 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
KRT6AP02538 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.02■■□□□ 1.12
KRT6AP02538 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.02■■□□□ 1.12
KRT6AP02538 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
KRT6AP02538 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT6AP02538 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT6AP02538 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
KRT6AP02538 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT6AP02538 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT6AP02538 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT6AP02538 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.01■■□□□ 1.11
KRT6AP02538 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT6AP02538 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT6AP02538 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT6AP02538 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT6AP02538 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT6AP02538 AC012354.3-201ENST00000623734 483 ntBASIC22.01■■□□□ 1.11
KRT6AP02538 AC012676.1-201ENST00000574705 1949 ntBASIC22.01■■□□□ 1.11
KRT6AP02538 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT6AP02538 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms