Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM235A6NFC5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM235A6NFC5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM235A6NFC5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM235A6NFC5 LINC00565-201ENST00000562710 2331 ntBASIC19.5■□□□□ 0.71
TMEM235A6NFC5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 KRT18P10-201ENST00000388836 1287 ntBASIC19.49■□□□□ 0.71
TMEM235A6NFC5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 DUSP8P3-201ENST00000399571 1760 ntBASIC19.49■□□□□ 0.71
TMEM235A6NFC5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM235A6NFC5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 AC092068.2-201ENST00000590491 1708 ntBASIC19.48■□□□□ 0.71
TMEM235A6NFC5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM235A6NFC5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM235A6NFC5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 AC007029.1-201ENST00000604183 313 ntBASIC19.46■□□□□ 0.71
TMEM235A6NFC5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TMEM235A6NFC5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 RAP2CP1-202ENST00000605179 643 ntBASIC19.45■□□□□ 0.7
TMEM235A6NFC5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TMEM235A6NFC5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMEM235A6NFC5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 AC022413.1-201ENST00000624602 984 ntBASIC19.43■□□□□ 0.7
TMEM235A6NFC5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM235A6NFC5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM235A6NFC5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM235A6NFC5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM235A6NFC5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM235A6NFC5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM235A6NFC5 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms