Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.09■■□□□ 1.29
TCRBV9S1A1TA0A576 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TCRBV9S1A1TA0A576 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV9S1A1TA0A576 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
TCRBV9S1A1TA0A576 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 AC092068.2-201ENST00000590491 1708 ntBASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV9S1A1TA0A576 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TCRBV9S1A1TA0A576 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.07■■□□□ 1.28
TCRBV9S1A1TA0A576 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TCRBV9S1A1TA0A576 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.06■■□□□ 1.28
TCRBV9S1A1TA0A576 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV9S1A1TA0A576 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TCRBV9S1A1TA0A576 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV9S1A1TA0A576 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 DUSP8P3-201ENST00000399571 1760 ntBASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 LONRF2P2-201ENST00000439212 571 ntBASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
TCRBV9S1A1TA0A576 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TCRBV9S1A1TA0A576 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV9S1A1TA0A576 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV9S1A1TA0A576 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV9S1A1TA0A576 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TCRBV9S1A1TA0A576 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TCRBV9S1A1TA0A576 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TCRBV9S1A1TA0A576 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.02■■□□□ 1.28
TCRBV9S1A1TA0A576 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TCRBV9S1A1TA0A576 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
TCRBV9S1A1TA0A576 AL022069.1-201ENST00000568025 1636 ntBASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TCRBV9S1A1TA0A576 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 RARRES2P2-201ENST00000394842 485 ntBASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TCRBV9S1A1TA0A576 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 U85056.1-201ENST00000616429 682 ntBASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 AC129492.7-201ENST00000622992 756 ntBASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 AL117328.2-201ENST00000624617 1940 ntBASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TCRBV9S1A1TA0A576 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TCRBV9S1A1TA0A576 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 AC233723.2-201ENST00000623798 2106 ntBASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms