Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV25A0A0B4J276 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV25A0A0B4J276 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 AL139125.2-201ENST00000623134 1869 ntBASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV25A0A0B4J276 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 AL356740.2-201ENST00000601559 647 ntBASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV25A0A0B4J276 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 ALDH1A3-203ENST00000557963 1670 ntBASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV25A0A0B4J276 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV25A0A0B4J276 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 LINC01124-201ENST00000409786 2117 ntBASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV25A0A0B4J276 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 MIR3621-201ENST00000580529 85 ntBASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV25A0A0B4J276 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 AC131212.1-201ENST00000613771 668 ntBASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms