Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 UGT1A2P-201ENST00000454886 866 ntBASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 AL358472.5-202ENST00000641448 1267 ntBASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 AL356585.2-201ENST00000625078 2396 ntBASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
AMBRA1Q9C0C7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 KRT8P24-201ENST00000560290 1559 ntBASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 TIMM17BP1-201ENST00000545713 516 ntBASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC027307.3-201ENST00000594262 1100 ntBASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 AL137783.1-201ENST00000623494 1896 ntBASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.01□□□□□ -0.17
AMBRA1Q9C0C7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms