Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 MRPS18AP1-201ENST00000414458 589 ntBASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 AC104794.3-201ENST00000566840 1248 ntBASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CHRDL1Q9BU40 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 AC136759.1-202ENST00000530858 2194 ntBASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 REXO1L2P-201ENST00000425429 2069 ntBASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CHRDL1Q9BU40 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CLK3P2-201ENST00000427566 1453 ntBASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 AC004790.1-201ENST00000612686 536 ntBASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 HSPA7-201ENST00000445535 1927 ntBASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 BX640514.1-201ENST00000583223 1918 ntBASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 AC117489.1-201ENST00000625169 3217 ntBASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CHRDL1Q9BU40 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms