Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 MYADML-201ENST00000474610 2147 ntBASIC20.64■□□□□ 0.89
CCDC7Q96M83 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 MIR663B-201ENST00000408361 115 ntBASIC20.63■□□□□ 0.89
CCDC7Q96M83 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 AL358472.3-201ENST00000608147 415 ntBASIC20.63■□□□□ 0.89
CCDC7Q96M83 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC7Q96M83 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC7Q96M83 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 HSPA7-201ENST00000445535 1927 ntBASIC20.62■□□□□ 0.89
CCDC7Q96M83 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.62■□□□□ 0.89
CCDC7Q96M83 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 CNN2P10-201ENST00000443067 918 ntBASIC20.62■□□□□ 0.89
CCDC7Q96M83 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AL354989.2-201ENST00000435838 1540 ntBASIC20.62■□□□□ 0.89
CCDC7Q96M83 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 INTS4P1-203ENST00000641008 3683 ntBASIC20.62■□□□□ 0.89
CCDC7Q96M83 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AC139712.1-201ENST00000378256 1875 ntBASIC20.62■□□□□ 0.89
CCDC7Q96M83 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC7Q96M83 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC7Q96M83 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC7Q96M83 AC018735.1-201ENST00000437208 1502 ntBASIC20.61■□□□□ 0.89
CCDC7Q96M83 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC7Q96M83 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC7Q96M83 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC7Q96M83 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC7Q96M83 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC7Q96M83 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC7Q96M83 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC7Q96M83 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC7Q96M83 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC7Q96M83 PUDPP3-201ENST00000445368 636 ntBASIC20.61■□□□□ 0.89
CCDC7Q96M83 AC005077.2-201ENST00000449786 690 ntBASIC20.61■□□□□ 0.89
CCDC7Q96M83 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC7Q96M83 HIST2H2BC-201ENST00000498492 580 ntBASIC20.61■□□□□ 0.89
CCDC7Q96M83 COX5BP1-201ENST00000507622 393 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms