Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 BEND3P1-201ENST00000421591 1944 ntBASIC11.24□□□□□ -0.61
LINC00477Q96M19 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00477Q96M19 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00477Q96M19 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC092135.3-201ENST00000624151 1846 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AL139094.1-201ENST00000405549 1188 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 VDAC1P7-201ENST00000462417 847 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC104596.2-201ENST00000512793 793 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 DUX4L47-201ENST00000566374 394 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AP001160.2-201ENST00000596071 487 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC093028.1-201ENST00000622998 982 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00477Q96M19 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00477Q96M19 AC006504.5-208ENST00000588784 2401 ntBASIC11.23□□□□□ -0.61
LINC00477Q96M19 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00477Q96M19 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00477Q96M19 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms