Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RNF183Q96D59 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.18□□□□□ -0.62
RNF183Q96D59 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 KRT8P35-201ENST00000483942 1338 ntBASIC11.18□□□□□ -0.62
RNF183Q96D59 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
RNF183Q96D59 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.18□□□□□ -0.62
RNF183Q96D59 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RNF183Q96D59 AL645937.2-201ENST00000396808 931 ntBASIC11.18□□□□□ -0.62
RNF183Q96D59 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.18□□□□□ -0.62
RNF183Q96D59 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF183Q96D59 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.18□□□□□ -0.62
RNF183Q96D59 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF183Q96D59 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RNF183Q96D59 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF183Q96D59 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
RNF183Q96D59 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF183Q96D59 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.17□□□□□ -0.62
RNF183Q96D59 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 LINC00528-201ENST00000600723 2160 ntBASIC11.17□□□□□ -0.62
RNF183Q96D59 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 AC093525.8-201ENST00000624099 1342 ntBASIC11.17□□□□□ -0.62
RNF183Q96D59 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.17□□□□□ -0.62
RNF183Q96D59 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RNF183Q96D59 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.17□□□□□ -0.62
RNF183Q96D59 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.17□□□□□ -0.62
RNF183Q96D59 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.17□□□□□ -0.62
RNF183Q96D59 RHOXF1P1-202ENST00000635473 501 ntBASIC11.17□□□□□ -0.62
RNF183Q96D59 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RNF183Q96D59 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.17□□□□□ -0.62
RNF183Q96D59 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RNF183Q96D59 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF183Q96D59 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.17□□□□□ -0.62
RNF183Q96D59 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms