Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC105129.2-201ENST00000559536 390 ntBASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP6V0A1Q93050 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP6V0A1Q93050 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP6V0A1Q93050 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AL008707.1-201ENST00000422498 534 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC079328.1-201ENST00000560358 952 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC008825.2-201ENST00000603374 718 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 BX088702.1-201ENST00000610784 235 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AP001505.2-201ENST00000616815 443 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC091544.8-201ENST00000619490 361 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TSPY26P-202ENST00000565928 3884 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 SHC1P1-201ENST00000425230 1745 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TUBBP5-203ENST00000508529 1334 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 LINC00528-201ENST00000600723 2160 ntBASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP6V0A1Q93050 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 DPM3-202ENST00000368399 517 ntBASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 AC010141.1-201ENST00000411585 623 ntBASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 AC106794.1-201ENST00000506935 792 ntBASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 CHMP4BP1-201ENST00000556017 588 ntBASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 BNIP3P13-201ENST00000599968 566 ntBASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 CU633904.3-201ENST00000624042 1029 ntBASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms