Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 BEND3P3-201ENST00000611030 2440 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 AC019294.4-201ENST00000561777 2905 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.19□□□□□ -0.3
AP3S1Q92572 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.19□□□□□ -0.3
AP3S1Q92572 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.19□□□□□ -0.3
AP3S1Q92572 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.19□□□□□ -0.3
AP3S1Q92572 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.19□□□□□ -0.3
AP3S1Q92572 AC112191.1-201ENST00000523689 701 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 AL049597.2-201ENST00000565575 961 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 SAMD11P1-201ENST00000571429 661 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 AC068137.2-201ENST00000605408 478 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.19□□□□□ -0.3
AP3S1Q92572 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 AC025580.3-201ENST00000617932 1424 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 RN7SL832P-201ENST00000607781 1756 ntBASIC13.19□□□□□ -0.3
AP3S1Q92572 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.19□□□□□ -0.3
AP3S1Q92572 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.19□□□□□ -0.3
AP3S1Q92572 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP3S1Q92572 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AP3S1Q92572 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 AC011840.2-201ENST00000563063 1520 ntBASIC13.18□□□□□ -0.3
AP3S1Q92572 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 AL360270.3-201ENST00000609118 1348 ntBASIC13.18□□□□□ -0.3
AP3S1Q92572 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
AP3S1Q92572 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
AP3S1Q92572 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.18□□□□□ -0.3
AP3S1Q92572 TARDBPP1-201ENST00000442013 1203 ntBASIC13.18□□□□□ -0.3
AP3S1Q92572 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 AF186996.4-201ENST00000467186 377 ntBASIC13.18□□□□□ -0.3
AP3S1Q92572 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.18□□□□□ -0.3
AP3S1Q92572 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
AP3S1Q92572 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.18□□□□□ -0.3
AP3S1Q92572 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.18□□□□□ -0.3
AP3S1Q92572 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP3S1Q92572 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
AP3S1Q92572 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
AP3S1Q92572 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms