Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC022080.1-201ENST00000366255 781 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC092810.2-201ENST00000431570 362 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 MRPS28-208ENST00000521605 437 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 ANAPC15-216ENST00000545680 872 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 BRD7P5-201ENST00000299197 1822 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 KRT18P36-201ENST00000411618 1276 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AL050344.1-202ENST00000429666 614 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 HNRNPA1P30-202ENST00000440699 997 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PCDHGB8P-201ENST00000502926 1973 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC006557.1-201ENST00000591211 1085 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 ACTBP1-201ENST00000417985 1113 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PQLC1P1-201ENST00000434950 429 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC114781.1-201ENST00000450559 1028 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC016304.1-201ENST00000476363 413 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PHBP8-201ENST00000493810 725 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC092368.1-201ENST00000568014 733 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AL137028.2-201ENST00000614601 256 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC024580.2-201ENST00000623363 231 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 TPM3P7-201ENST00000338274 732 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 OR1X5P-201ENST00000510464 894 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 HAX1-211ENST00000532105 771 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 RAB11A-203ENST00000564910 978 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 AC136475.7-201ENST00000602949 592 ntBASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 UBA3-212ENST00000630585 390 ntTSL 4 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNE2Q8WXH0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms