Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 PCDH8P1-201ENST00000428983 2773 ntBASIC21.29■■□□□ 1
ARHGEF40Q8TER5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 FAM197Y6-201ENST00000420524 766 ntBASIC21.29■■□□□ 1
ARHGEF40Q8TER5 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 LY6E-215ENST00000523847 427 ntTSL 3 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.29■■□□□ 1
ARHGEF40Q8TER5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 AL139384.1-201ENST00000612143 3047 ntBASIC21.28■■□□□ 1
ARHGEF40Q8TER5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 FDPSP7-201ENST00000429043 1054 ntBASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CDK4P1-201ENST00000454213 828 ntBASIC21.28■■□□□ 1
ARHGEF40Q8TER5 STK24P1-201ENST00000455035 1291 ntBASIC21.28■■□□□ 1
ARHGEF40Q8TER5 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 AC093300.1-201ENST00000510368 1201 ntBASIC21.28■■□□□ 1
ARHGEF40Q8TER5 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CMC2-204ENST00000562713 573 ntTSL 3 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CMC2-209ENST00000565108 399 ntTSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF40Q8TER5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 AC006328.1-201ENST00000437571 379 ntBASIC21.27■■□□□ 1
ARHGEF40Q8TER5 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 AC091304.3-201ENST00000566500 716 ntBASIC21.27■■□□□ 1
ARHGEF40Q8TER5 MIR4265-201ENST00000582152 99 ntBASIC21.27■■□□□ 1
ARHGEF40Q8TER5 AC005777.1-201ENST00000588332 187 ntBASIC21.27■■□□□ 1
ARHGEF40Q8TER5 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 AC245369.7-201ENST00000631386 350 ntBASIC21.27■■□□□ 1
ARHGEF40Q8TER5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF40Q8TER5 PRORSD1P-202ENST00000563365 2154 ntBASIC21.27■□□□□ 0.99
ARHGEF40Q8TER5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF40Q8TER5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF40Q8TER5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
ARHGEF40Q8TER5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF40Q8TER5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC21.26■□□□□ 0.99
ARHGEF40Q8TER5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF40Q8TER5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.26■□□□□ 0.99
ARHGEF40Q8TER5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms