Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCC2Q8TAQ2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCC2Q8TAQ2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCC2Q8TAQ2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCC2Q8TAQ2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCC2Q8TAQ2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 AC152010.1-201ENST00000415779 2006 ntBASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 AL138725.1-201ENST00000407347 1314 ntBASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCC2Q8TAQ2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 RN7SKP230-201ENST00000365642 335 ntBASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 AC132938.4-201ENST00000623835 848 ntBASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 RHOXF1P1-202ENST00000635473 501 ntBASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.44■□□□□ 0.38
SMARCC2Q8TAQ2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.43■□□□□ 0.38
SMARCC2Q8TAQ2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms