Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 LILRP1-201ENST00000444199 1370 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AL139010.1-201ENST00000454878 894 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 FOSL1P1-201ENST00000511041 816 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 RNA5SP410-201ENST00000516285 106 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 OR7E14P-202ENST00000530490 1290 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 MIR4751-201ENST00000578027 74 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AL356488.2-201ENST00000602755 427 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AC005593.1-201ENST00000624894 515 ntBASIC11.32□□□□□ -0.6
MRPL54Q6P161 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MRPL54Q6P161 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
MRPL54Q6P161 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL54Q6P161 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.31□□□□□ -0.6
MRPL54Q6P161 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MRPL54Q6P161 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms