Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GABREP78334 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.16□□□□□ -0.14
GABREP78334 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABREP78334 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.15□□□□□ -0.14
GABREP78334 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.15□□□□□ -0.14
GABREP78334 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.15□□□□□ -0.14
GABREP78334 HYMAI-201ENST00000635591 3347 ntBASIC14.15□□□□□ -0.14
GABREP78334 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 KRT8P21-201ENST00000430398 1491 ntBASIC14.15□□□□□ -0.14
GABREP78334 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GABREP78334 FAM90A7P-201ENST00000382628 1395 ntBASIC14.15□□□□□ -0.14
GABREP78334 FAM90A23P-201ENST00000400136 1395 ntBASIC14.15□□□□□ -0.14
GABREP78334 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 AP000356.3-201ENST00000382243 753 ntBASIC14.15□□□□□ -0.14
GABREP78334 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.15□□□□□ -0.14
GABREP78334 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.15□□□□□ -0.14
GABREP78334 RPL8P2-201ENST00000430538 502 ntBASIC14.15□□□□□ -0.14
GABREP78334 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.15□□□□□ -0.14
GABREP78334 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
GABREP78334 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.15□□□□□ -0.14
GABREP78334 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.15□□□□□ -0.14
GABREP78334 AC009084.3-201ENST00000623356 437 ntBASIC14.15□□□□□ -0.14
GABREP78334 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
GABREP78334 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.15□□□□□ -0.14
GABREP78334 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABREP78334 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
GABREP78334 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.14□□□□□ -0.15
GABREP78334 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 AC006058.4-201ENST00000624016 1670 ntBASIC14.14□□□□□ -0.15
GABREP78334 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 CAP2P1-201ENST00000557743 1390 ntBASIC14.14□□□□□ -0.15
GABREP78334 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.14□□□□□ -0.15
GABREP78334 RPL7P35-201ENST00000446943 740 ntBASIC14.14□□□□□ -0.15
GABREP78334 RN7SL67P-201ENST00000492147 296 ntBASIC14.14□□□□□ -0.15
GABREP78334 AC008723.1-201ENST00000506922 207 ntBASIC14.14□□□□□ -0.15
GABREP78334 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.14□□□□□ -0.15
GABREP78334 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.14□□□□□ -0.15
GABREP78334 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.14□□□□□ -0.15
GABREP78334 AC008825.2-201ENST00000603374 718 ntBASIC14.14□□□□□ -0.15
GABREP78334 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.14□□□□□ -0.15
GABREP78334 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
GABREP78334 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABREP78334 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms