Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 C18orf15-201ENST00000623680 2534 ntBASIC14.54□□□□□ -0.08
CSNK1EP49674 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1EP49674 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 AL645933.1-201ENST00000440087 609 ntBASIC14.54□□□□□ -0.08
CSNK1EP49674 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1EP49674 GCOM2-201ENST00000509133 1104 ntBASIC14.54□□□□□ -0.08
CSNK1EP49674 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1EP49674 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.54□□□□□ -0.08
CSNK1EP49674 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1EP49674 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CSNK1EP49674 AC087045.2-201ENST00000606279 1003 ntBASIC14.54□□□□□ -0.08
CSNK1EP49674 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CSNK1EP49674 CYP4F23P-201ENST00000593402 1579 ntBASIC14.54□□□□□ -0.08
CSNK1EP49674 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 ZBED1P1-201ENST00000502364 1930 ntBASIC14.54□□□□□ -0.08
CSNK1EP49674 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1EP49674 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1EP49674 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 AL136379.1-201ENST00000623471 2642 ntBASIC14.53□□□□□ -0.08
CSNK1EP49674 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 FRMPD2B-201ENST00000431305 1347 ntBASIC14.53□□□□□ -0.08
CSNK1EP49674 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1EP49674 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.53□□□□□ -0.08
CSNK1EP49674 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CSNK1EP49674 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.53□□□□□ -0.08
CSNK1EP49674 NPM1P43-201ENST00000558669 786 ntBASIC14.53□□□□□ -0.08
CSNK1EP49674 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1EP49674 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1EP49674 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CSNK1EP49674 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1EP49674 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CSNK1EP49674 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1EP49674 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1EP49674 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1EP49674 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1EP49674 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1EP49674 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
CSNK1EP49674 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1EP49674 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1EP49674 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1EP49674 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1EP49674 AC015909.3-201ENST00000572855 1794 ntBASIC14.52□□□□□ -0.08
CSNK1EP49674 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.52□□□□□ -0.08
CSNK1EP49674 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1EP49674 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms