Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
CSNK1DP48730 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1DP48730 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CSNK1DP48730 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 AC004898.1-201ENST00000451057 766 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 AC104306.2-201ENST00000451877 341 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.87□□□□□ -0.03
CSNK1DP48730 AC126915.1-201ENST00000522847 1038 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 AC005730.2-201ENST00000564549 1184 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.87□□□□□ -0.03
CSNK1DP48730 MIR6074-201ENST00000612054 107 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 AP000346.4-201ENST00000614827 381 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 Z98259.2-201ENST00000641583 609 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
CSNK1DP48730 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 AC113367.3-201ENST00000508316 1912 ntBASIC14.87□□□□□ -0.03
CSNK1DP48730 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CSNK1DP48730 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CSNK1DP48730 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1DP48730 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1DP48730 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1DP48730 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CSNK1DP48730 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 AL645933.1-201ENST00000440087 609 ntBASIC14.86□□□□□ -0.03
CSNK1DP48730 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 AC021723.1-201ENST00000486306 515 ntBASIC14.86□□□□□ -0.03
CSNK1DP48730 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.86□□□□□ -0.03
CSNK1DP48730 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.86□□□□□ -0.03
CSNK1DP48730 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.86□□□□□ -0.03
CSNK1DP48730 MIR4538-201ENST00000581377 78 ntBASIC14.86□□□□□ -0.03
CSNK1DP48730 BNIP3P13-201ENST00000599968 566 ntBASIC14.86□□□□□ -0.03
CSNK1DP48730 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 AC022748.3-201ENST00000621828 275 ntBASIC14.86□□□□□ -0.03
CSNK1DP48730 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.86□□□□□ -0.03
CSNK1DP48730 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.86□□□□□ -0.03
CSNK1DP48730 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CSNK1DP48730 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CSNK1DP48730 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1DP48730 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CSNK1DP48730 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CSNK1DP48730 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CSNK1DP48730 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms