Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN1P35523 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN1P35523 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN1P35523 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN1P35523 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLCN1P35523 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 GOLGA2P5-201ENST00000266746 2395 ntBASIC17.05■□□□□ 0.32
CLCN1P35523 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN1P35523 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN1P35523 CNN2P11-201ENST00000429351 262 ntBASIC17.05■□□□□ 0.32
CLCN1P35523 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 PHKG1P2-201ENST00000457537 863 ntBASIC17.05■□□□□ 0.32
CLCN1P35523 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLCN1P35523 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.05■□□□□ 0.32
CLCN1P35523 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 AC003101.2-201ENST00000612557 442 ntBASIC17.05■□□□□ 0.32
CLCN1P35523 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CLCN1P35523 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLCN1P35523 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN1P35523 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLCN1P35523 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
CLCN1P35523 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLCN1P35523 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 AL353705.2-201ENST00000428243 662 ntBASIC17.04■□□□□ 0.32
CLCN1P35523 MIR4453-201ENST00000584019 89 ntBASIC17.04■□□□□ 0.32
CLCN1P35523 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.04■□□□□ 0.32
CLCN1P35523 AL450472.2-201ENST00000603663 1156 ntBASIC17.04■□□□□ 0.32
CLCN1P35523 AP001059.3-201ENST00000619053 235 ntBASIC17.04■□□□□ 0.32
CLCN1P35523 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN1P35523 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCN1P35523 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN1P35523 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CLCN1P35523 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 AP000437.1-201ENST00000624057 2085 ntBASIC17.03■□□□□ 0.32
CLCN1P35523 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLCN1P35523 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN1P35523 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN1P35523 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms