Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 JPT2-203ENST00000382711 894 ntTSL 4 BASIC20.43■□□□□ 0.86
CPS1P31327 KRT18P4-201ENST00000422599 1288 ntBASIC20.43■□□□□ 0.86
CPS1P31327 GAS5-209ENST00000430245 723 ntTSL 3 BASIC20.43■□□□□ 0.86
CPS1P31327 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CPS1P31327 AC092896.1-201ENST00000465850 380 ntBASIC20.43■□□□□ 0.86
CPS1P31327 PFN2-212ENST00000490975 858 ntTSL 4 BASIC20.43■□□□□ 0.86
CPS1P31327 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.43■□□□□ 0.86
CPS1P31327 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CPS1P31327 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CPS1P31327 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 AC139712.1-201ENST00000378256 1875 ntBASIC20.43■□□□□ 0.86
CPS1P31327 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 OLA1P2-201ENST00000395519 1264 ntBASIC20.43■□□□□ 0.86
CPS1P31327 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPS1P31327 AC027612.2-202ENST00000445955 1199 ntBASIC20.43■□□□□ 0.86
CPS1P31327 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.43■□□□□ 0.86
CPS1P31327 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CPS1P31327 RN7SL147P-201ENST00000487345 298 ntBASIC20.43■□□□□ 0.86
CPS1P31327 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.43■□□□□ 0.86
CPS1P31327 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.43■□□□□ 0.86
CPS1P31327 DRG2-220ENST00000583355 891 ntTSL 3 BASIC20.43■□□□□ 0.86
CPS1P31327 AC010503.4-201ENST00000615487 688 ntBASIC20.43■□□□□ 0.86
CPS1P31327 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC20.43■□□□□ 0.86
CPS1P31327 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.42■□□□□ 0.86
CPS1P31327 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.42■□□□□ 0.86
CPS1P31327 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPS1P31327 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 SCARNA12-201ENST00000459155 270 ntBASIC20.42■□□□□ 0.86
CPS1P31327 AC006529.1-201ENST00000459978 637 ntBASIC20.42■□□□□ 0.86
CPS1P31327 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.42■□□□□ 0.86
CPS1P31327 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.42■□□□□ 0.86
CPS1P31327 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.42■□□□□ 0.86
CPS1P31327 AL512324.3-201ENST00000619383 882 ntBASIC20.42■□□□□ 0.86
CPS1P31327 SSR4P1-203ENST00000599569 2260 ntBASIC20.42■□□□□ 0.86
CPS1P31327 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPS1P31327 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.41■□□□□ 0.86
CPS1P31327 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPS1P31327 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
CPS1P31327 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 AC098657.1-201ENST00000416270 1135 ntBASIC20.41■□□□□ 0.86
CPS1P31327 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.41■□□□□ 0.86
CPS1P31327 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.41■□□□□ 0.86
CPS1P31327 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.41■□□□□ 0.86
CPS1P31327 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC20.41■□□□□ 0.86
CPS1P31327 PSME2-217ENST00000615264 874 ntTSL 5 BASIC20.41■□□□□ 0.86
CPS1P31327 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 PSME2-218ENST00000630027 185 ntTSL 3 BASIC20.41■□□□□ 0.86
CPS1P31327 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CPS1P31327 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms