Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.21□□□□□ -0.13
LAMA1P25391 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.21□□□□□ -0.13
LAMA1P25391 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.21□□□□□ -0.14
LAMA1P25391 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LAMA1P25391 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LAMA1P25391 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA1P25391 AC073347.1-201ENST00000421633 2643 ntBASIC14.21□□□□□ -0.14
LAMA1P25391 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.21□□□□□ -0.14
LAMA1P25391 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.21□□□□□ -0.14
LAMA1P25391 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA1P25391 AC006529.1-201ENST00000459978 637 ntBASIC14.21□□□□□ -0.14
LAMA1P25391 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.21□□□□□ -0.14
LAMA1P25391 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA1P25391 RNA5SP417-201ENST00000516459 108 ntBASIC14.21□□□□□ -0.14
LAMA1P25391 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA1P25391 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.21□□□□□ -0.14
LAMA1P25391 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.21□□□□□ -0.14
LAMA1P25391 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 AC026691.1-201ENST00000602502 2017 ntBASIC14.2□□□□□ -0.14
LAMA1P25391 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 AC106047.2-201ENST00000511723 743 ntBASIC14.2□□□□□ -0.14
LAMA1P25391 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA1P25391 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA1P25391 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA1P25391 AC124068.2-201ENST00000569473 1109 ntBASIC14.2□□□□□ -0.14
LAMA1P25391 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.2□□□□□ -0.14
LAMA1P25391 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LAMA1P25391 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LAMA1P25391 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LAMA1P25391 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
LAMA1P25391 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA1P25391 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.2□□□□□ -0.14
LAMA1P25391 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA1P25391 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 AC005014.1-201ENST00000432006 2976 ntBASIC14.2□□□□□ -0.14
LAMA1P25391 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA1P25391 CTBP2P8-201ENST00000422584 1330 ntBASIC14.2□□□□□ -0.14
LAMA1P25391 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LAMA1P25391 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.19□□□□□ -0.14
LAMA1P25391 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LAMA1P25391 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.19□□□□□ -0.14
LAMA1P25391 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
LAMA1P25391 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
LAMA1P25391 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
LAMA1P25391 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LAMA1P25391 AC063952.3-201ENST00000467756 308 ntBASIC14.19□□□□□ -0.14
LAMA1P25391 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.19□□□□□ -0.14
LAMA1P25391 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 AC010976.2-201ENST00000609697 852 ntBASIC14.19□□□□□ -0.14
LAMA1P25391 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.19□□□□□ -0.14
LAMA1P25391 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.19□□□□□ -0.14
LAMA1P25391 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
LAMA1P25391 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LAMA1P25391 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA1P25391 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms