Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.45■□□□□ 0.06
CD48P09326 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.45■□□□□ 0.06
CD48P09326 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 BCRP2-202ENST00000447763 634 ntBASIC15.45■□□□□ 0.06
CD48P09326 BCRP6-201ENST00000510112 632 ntBASIC15.45■□□□□ 0.06
CD48P09326 BCRP7-201ENST00000511549 544 ntBASIC15.45■□□□□ 0.06
CD48P09326 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.45■□□□□ 0.06
CD48P09326 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.45■□□□□ 0.06
CD48P09326 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.45■□□□□ 0.06
CD48P09326 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.45■□□□□ 0.06
CD48P09326 ECM1P1-201ENST00000604092 1279 ntBASIC15.45■□□□□ 0.06
CD48P09326 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 AC138466.3-201ENST00000619983 221 ntBASIC15.45■□□□□ 0.06
CD48P09326 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 IGHV3-72-202ENST00000621503 303 ntBASIC15.45■□□□□ 0.06
CD48P09326 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 AL928921.2-201ENST00000641325 2442 ntBASIC15.45■□□□□ 0.06
CD48P09326 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CD48P09326 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.45■□□□□ 0.06
CD48P09326 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.45■□□□□ 0.06
CD48P09326 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD48P09326 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 AC092933.1-201ENST00000393644 945 ntBASIC15.44■□□□□ 0.06
CD48P09326 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 AC007389.4-201ENST00000454674 793 ntBASIC15.44■□□□□ 0.06
CD48P09326 AL590640.2-201ENST00000457038 527 ntBASIC15.44■□□□□ 0.06
CD48P09326 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 SLC25A47P1-201ENST00000531577 414 ntBASIC15.44■□□□□ 0.06
CD48P09326 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 AC025279.2-201ENST00000569730 653 ntBASIC15.44■□□□□ 0.06
CD48P09326 RN7SL48P-201ENST00000579283 293 ntBASIC15.44■□□□□ 0.06
CD48P09326 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.44■□□□□ 0.06
CD48P09326 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.44■□□□□ 0.06
CD48P09326 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.44■□□□□ 0.06
CD48P09326 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 MYO15B-237ENST00000642007 4893 ntBASIC15.44■□□□□ 0.06
CD48P09326 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD48P09326 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.44■□□□□ 0.06
CD48P09326 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms