Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC9.21□□□□□ -0.94
PKHD1P08F94 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 KRT8P34-201ENST00000577607 1044 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 RN7SL602P-201ENST00000578326 324 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 RN7SL718P-201ENST00000581254 303 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 EMP3-204ENST00000596315 761 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC9.21□□□□□ -0.94
PKHD1P08F94 AC113385.2-201ENST00000614465 762 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC9.21□□□□□ -0.94
PKHD1P08F94 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC9.21□□□□□ -0.94
PKHD1P08F94 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.21□□□□□ -0.94
PKHD1P08F94 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC9.21□□□□□ -0.94
PKHD1P08F94 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
PKHD1P08F94 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC9.21□□□□□ -0.94
PKHD1P08F94 MIR2278-201ENST00000516344 96 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC9.21□□□□□ -0.94
PKHD1P08F94 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PKHD1P08F94 AC091304.3-201ENST00000566500 716 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 NAT9-219ENST00000582524 573 ntTSL 4 BASIC9.21□□□□□ -0.94
PKHD1P08F94 AL450487.2-201ENST00000615934 407 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 ESR1-214ENST00000638569 132 ntTSL 5 BASIC9.21□□□□□ -0.94
PKHD1P08F94 AL357143.1-203ENST00000639750 881 ntBASIC9.21□□□□□ -0.94
PKHD1P08F94 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PKHD1P08F94 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC9.2□□□□□ -0.94
PKHD1P08F94 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.2□□□□□ -0.94
PKHD1P08F94 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC9.2□□□□□ -0.94
PKHD1P08F94 ALG1L15P-201ENST00000482834 794 ntBASIC9.2□□□□□ -0.94
PKHD1P08F94 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 AL132994.1-201ENST00000554098 400 ntBASIC9.2□□□□□ -0.94
PKHD1P08F94 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 RN7SL556P-201ENST00000582856 298 ntBASIC9.2□□□□□ -0.94
PKHD1P08F94 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 AL512324.3-201ENST00000619383 882 ntBASIC9.2□□□□□ -0.94
PKHD1P08F94 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
PKHD1P08F94 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC9.2□□□□□ -0.94
PKHD1P08F94 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 SARS-202ENST00000369923 1882 ntTSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 AC232323.1-201ENST00000540724 2099 ntBASIC9.2□□□□□ -0.94
PKHD1P08F94 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PKHD1P08F94 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 U73169.1-201ENST00000395152 367 ntBASIC9.2□□□□□ -0.94
PKHD1P08F94 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC9.2□□□□□ -0.94
PKHD1P08F94 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC9.2□□□□□ -0.94
PKHD1P08F94 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PKHD1P08F94 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PKHD1P08F94 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms