Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 AGGF1P1-201ENST00000509500 2073 ntBASIC15.12■□□□□ 0.01
HLA-DQB2P05538 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 BOLA2P3-201ENST00000404566 256 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 MIR1909-201ENST00000411312 80 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 KLF2P4-201ENST00000451959 1225 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ACA64.2-201ENST00000459014 129 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 COX5BP1-201ENST00000507622 393 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 HILS1-202ENST00000545329 423 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 MIR4683-201ENST00000579659 81 ntBASIC15.11■□□□□ 0.01
HLA-DQB2P05538 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DQB2P05538 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 AC026748.1-201ENST00000624349 3251 ntBASIC15.1■□□□□ 0.01
HLA-DQB2P05538 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 AC026954.1-201ENST00000429771 1293 ntBASIC15.1■□□□□ 0.01
HLA-DQB2P05538 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.1■□□□□ 0.01
HLA-DQB2P05538 RN7SL713P-201ENST00000582127 302 ntBASIC15.1■□□□□ 0.01
HLA-DQB2P05538 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms