Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHGBP05060 SNX18-202ENST00000343017 3140 ntBASIC17.83■□□□□ 0.45
CHGBP05060 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.83■□□□□ 0.45
CHGBP05060 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHGBP05060 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.83■□□□□ 0.45
CHGBP05060 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHGBP05060 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHGBP05060 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.83■□□□□ 0.45
CHGBP05060 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHGBP05060 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHGBP05060 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 MRPL37P1-201ENST00000592451 1337 ntBASIC17.83■□□□□ 0.44
CHGBP05060 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.83■□□□□ 0.44
CHGBP05060 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.83■□□□□ 0.44
CHGBP05060 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 BTBD6P1-201ENST00000412176 1267 ntBASIC17.83■□□□□ 0.44
CHGBP05060 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 AL354877.1-201ENST00000424412 413 ntBASIC17.83■□□□□ 0.44
CHGBP05060 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.83■□□□□ 0.44
CHGBP05060 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.83■□□□□ 0.44
CHGBP05060 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.83■□□□□ 0.44
CHGBP05060 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.83■□□□□ 0.44
CHGBP05060 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 AC244157.2-201ENST00000616239 1006 ntBASIC17.83■□□□□ 0.44
CHGBP05060 AL162426.1-201ENST00000624141 743 ntBASIC17.83■□□□□ 0.44
CHGBP05060 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHGBP05060 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.83■□□□□ 0.44
CHGBP05060 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.83■□□□□ 0.44
CHGBP05060 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 AC244394.1-201ENST00000435000 1665 ntBASIC17.83■□□□□ 0.44
CHGBP05060 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.83■□□□□ 0.44
CHGBP05060 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHGBP05060 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.83■□□□□ 0.44
CHGBP05060 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CHGBP05060 AC232323.1-201ENST00000540724 2099 ntBASIC17.83■□□□□ 0.44
CHGBP05060 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CHGBP05060 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.82■□□□□ 0.44
CHGBP05060 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.82■□□□□ 0.44
CHGBP05060 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHGBP05060 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.82■□□□□ 0.44
CHGBP05060 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.82■□□□□ 0.44
CHGBP05060 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.82■□□□□ 0.44
CHGBP05060 AC079178.1-201ENST00000420915 656 ntBASIC17.82■□□□□ 0.44
CHGBP05060 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.82■□□□□ 0.44
CHGBP05060 PUDPP3-201ENST00000445368 636 ntBASIC17.82■□□□□ 0.44
CHGBP05060 RNMTL1P1-201ENST00000454103 560 ntBASIC17.82■□□□□ 0.44
CHGBP05060 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.82■□□□□ 0.44
CHGBP05060 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.82■□□□□ 0.44
CHGBP05060 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.82■□□□□ 0.44
CHGBP05060 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.82■□□□□ 0.44
CHGBP05060 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.82■□□□□ 0.44
CHGBP05060 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.82■□□□□ 0.44
CHGBP05060 AL590440.2-201ENST00000641973 1595 ntBASIC17.82■□□□□ 0.44
CHGBP05060 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHGBP05060 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHGBP05060 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHGBP05060 AC012617.1-204ENST00000586340 2305 ntBASIC17.81■□□□□ 0.44
CHGBP05060 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms