Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 AC012508.2-201ENST00000567613 1472 ntBASIC14.75□□□□□ -0.05
PDGFBP01127 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDGFBP01127 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDGFBP01127 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.75□□□□□ -0.05
PDGFBP01127 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.74□□□□□ -0.05
PDGFBP01127 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.74□□□□□ -0.05
PDGFBP01127 MTHFR-217ENST00000641820 1569 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.74□□□□□ -0.05
PDGFBP01127 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.74□□□□□ -0.05
PDGFBP01127 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PDGFBP01127 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PDGFBP01127 NHP2P1-201ENST00000335274 462 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 MIR1301-201ENST00000408518 82 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.74□□□□□ -0.05
PDGFBP01127 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 RN7SL23P-201ENST00000484055 275 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.74□□□□□ -0.05
PDGFBP01127 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.74□□□□□ -0.05
PDGFBP01127 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 AC131206.1-201ENST00000538078 1211 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 KRT8P1-201ENST00000557533 1207 ntBASIC14.74□□□□□ -0.05
PDGFBP01127 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.74□□□□□ -0.05
PDGFBP01127 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PDGFBP01127 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.74□□□□□ -0.05
PDGFBP01127 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.74□□□□□ -0.05
PDGFBP01127 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PDGFBP01127 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.74□□□□□ -0.05
PDGFBP01127 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDGFBP01127 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.73□□□□□ -0.05
PDGFBP01127 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PDGFBP01127 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 PYY2-201ENST00000315776 282 ntBASIC14.73□□□□□ -0.05
PDGFBP01127 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFBP01127 AL929302.1-201ENST00000426556 871 ntBASIC14.73□□□□□ -0.05
PDGFBP01127 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFBP01127 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.73□□□□□ -0.05
PDGFBP01127 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.73□□□□□ -0.05
PDGFBP01127 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.73□□□□□ -0.05
PDGFBP01127 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDGFBP01127 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.73□□□□□ -0.05
PDGFBP01127 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDGFBP01127 LILRP1-201ENST00000444199 1370 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms