Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.7□□□□□ -0.06
CPNE6O95741 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CPNE6O95741 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.7□□□□□ -0.06
CPNE6O95741 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.7□□□□□ -0.06
CPNE6O95741 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
CPNE6O95741 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.7□□□□□ -0.06
CPNE6O95741 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.7□□□□□ -0.06
CPNE6O95741 AL008638.5-201ENST00000623814 1298 ntBASIC14.7□□□□□ -0.06
CPNE6O95741 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CPNE6O95741 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.7□□□□□ -0.06
CPNE6O95741 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.7□□□□□ -0.06
CPNE6O95741 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CPNE6O95741 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPNE6O95741 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 AC009090.5-201ENST00000624886 2285 ntBASIC14.69□□□□□ -0.06
CPNE6O95741 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CPNE6O95741 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
CPNE6O95741 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.69□□□□□ -0.06
CPNE6O95741 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CPNE6O95741 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 RPSAP36-202ENST00000494591 1261 ntBASIC14.69□□□□□ -0.06
CPNE6O95741 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.69□□□□□ -0.06
CPNE6O95741 AC005695.3-201ENST00000614522 232 ntBASIC14.69□□□□□ -0.06
CPNE6O95741 AL603764.1-201ENST00000636452 321 ntBASIC14.69□□□□□ -0.06
CPNE6O95741 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.69□□□□□ -0.06
CPNE6O95741 AL359183.1-201ENST00000623796 2132 ntBASIC14.69□□□□□ -0.06
CPNE6O95741 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CPNE6O95741 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.69□□□□□ -0.06
CPNE6O95741 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CPNE6O95741 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
CPNE6O95741 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE6O95741 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE6O95741 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 AC010327.5-201ENST00000586923 3061 ntBASIC14.68□□□□□ -0.06
CPNE6O95741 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE6O95741 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CPNE6O95741 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE6O95741 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE6O95741 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE6O95741 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 FAM8A4P-201ENST00000435433 1213 ntBASIC14.68□□□□□ -0.06
CPNE6O95741 AC245100.3-201ENST00000441281 285 ntBASIC14.68□□□□□ -0.06
CPNE6O95741 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE6O95741 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE6O95741 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.68□□□□□ -0.06
CPNE6O95741 ZNF767P-206ENST00000513792 565 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms