Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.33□□□□□ -0.28
ALX3O95076 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ALX3O95076 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALX3O95076 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALX3O95076 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.33□□□□□ -0.28
ALX3O95076 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ALX3O95076 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALX3O95076 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALX3O95076 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ALX3O95076 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 AL080243.2-201ENST00000418783 582 ntBASIC13.32□□□□□ -0.28
ALX3O95076 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 MTND6P24-201ENST00000440466 518 ntBASIC13.32□□□□□ -0.28
ALX3O95076 RPL13P2-201ENST00000440687 659 ntBASIC13.32□□□□□ -0.28
ALX3O95076 BCRP1-201ENST00000444246 691 ntBASIC13.32□□□□□ -0.28
ALX3O95076 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ALX3O95076 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.32□□□□□ -0.28
ALX3O95076 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.32□□□□□ -0.28
ALX3O95076 MIR4453-201ENST00000584019 89 ntBASIC13.32□□□□□ -0.28
ALX3O95076 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.32□□□□□ -0.28
ALX3O95076 AL589739.1-201ENST00000607720 493 ntBASIC13.32□□□□□ -0.28
ALX3O95076 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 AC004241.5-201ENST00000623870 2448 ntBASIC13.32□□□□□ -0.28
ALX3O95076 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ALX3O95076 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALX3O95076 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ALX3O95076 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
ALX3O95076 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.31□□□□□ -0.28
ALX3O95076 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
ALX3O95076 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ALX3O95076 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.31□□□□□ -0.28
ALX3O95076 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.31□□□□□ -0.28
ALX3O95076 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.31□□□□□ -0.28
ALX3O95076 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALX3O95076 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ALX3O95076 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.31□□□□□ -0.28
ALX3O95076 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.31□□□□□ -0.28
ALX3O95076 MTATP6P19-201ENST00000413797 659 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms