Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC3O60481 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZIC3O60481 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.37□□□□□ -0.27
ZIC3O60481 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ZIC3O60481 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ZIC3O60481 AC103988.2-201ENST00000561804 725 ntBASIC13.37□□□□□ -0.27
ZIC3O60481 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.37□□□□□ -0.27
ZIC3O60481 AL008638.5-201ENST00000623814 1298 ntBASIC13.37□□□□□ -0.27
ZIC3O60481 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.37□□□□□ -0.27
ZIC3O60481 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZIC3O60481 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
ZIC3O60481 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 AC103702.1-201ENST00000548801 2630 ntBASIC13.37□□□□□ -0.27
ZIC3O60481 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZIC3O60481 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZIC3O60481 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ZIC3O60481 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ZIC3O60481 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ZIC3O60481 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC3O60481 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC3O60481 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC3O60481 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.36□□□□□ -0.27
ZIC3O60481 AL035414.1-201ENST00000451327 857 ntBASIC13.36□□□□□ -0.27
ZIC3O60481 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.36□□□□□ -0.27
ZIC3O60481 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 AC132192.2-201ENST00000596206 1147 ntBASIC13.36□□□□□ -0.27
ZIC3O60481 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.36□□□□□ -0.27
ZIC3O60481 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 AL354702.1-201ENST00000442006 1960 ntBASIC13.36□□□□□ -0.27
ZIC3O60481 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms