Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.75■□□□□ 0.27
ACTN4O43707 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.75■□□□□ 0.27
ACTN4O43707 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ACTN4O43707 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ACTN4O43707 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 MYADML-201ENST00000474610 2147 ntBASIC16.75■□□□□ 0.27
ACTN4O43707 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ACTN4O43707 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.74■□□□□ 0.27
ACTN4O43707 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
ACTN4O43707 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.74■□□□□ 0.27
ACTN4O43707 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.74■□□□□ 0.27
ACTN4O43707 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.74■□□□□ 0.27
ACTN4O43707 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.74■□□□□ 0.27
ACTN4O43707 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ACTN4O43707 KRT18P25-201ENST00000508931 1278 ntBASIC16.74■□□□□ 0.27
ACTN4O43707 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ACTN4O43707 AC090505.1-201ENST00000430515 1834 ntBASIC16.74■□□□□ 0.27
ACTN4O43707 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.74■□□□□ 0.27
ACTN4O43707 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ACTN4O43707 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ACTN4O43707 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 PIN1P1-201ENST00000412108 996 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 POM121L8P-201ENST00000417732 1281 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.73■□□□□ 0.27
ACTN4O43707 POM121L9P-203ENST00000441984 1285 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 GCOM2-201ENST00000509133 1104 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 AC138696.2-201ENST00000607376 223 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 AC011840.2-201ENST00000563063 1520 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ACTN4O43707 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 AL136172.1-201ENST00000598590 1394 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.73■□□□□ 0.27
ACTN4O43707 AC016397.2-201ENST00000624848 1985 ntBASIC16.73■□□□□ 0.27
ACTN4O43707 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ACTN4O43707 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACTN4O43707 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms