Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
UPK2O00526 SOCS2P1-201ENST00000417727 557 ntBASIC12.01□□□□□ -0.49
UPK2O00526 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.01□□□□□ -0.49
UPK2O00526 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 AC092552.1-201ENST00000547243 906 ntBASIC12.01□□□□□ -0.49
UPK2O00526 AL359711.2-201ENST00000563105 872 ntBASIC12.01□□□□□ -0.49
UPK2O00526 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
UPK2O00526 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.01□□□□□ -0.49
UPK2O00526 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.01□□□□□ -0.49
UPK2O00526 AC005498.2-205ENST00000593218 784 ntBASIC12.01□□□□□ -0.49
UPK2O00526 AC092364.2-202ENST00000597012 1073 ntBASIC12.01□□□□□ -0.49
UPK2O00526 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.01□□□□□ -0.49
UPK2O00526 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
UPK2O00526 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 LRRC59-203ENST00000576448 1531 ntBASIC12.01□□□□□ -0.49
UPK2O00526 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
UPK2O00526 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.01□□□□□ -0.49
UPK2O00526 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK2O00526 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK2O00526 AC041040.2-201ENST00000622926 2899 ntBASIC12.01□□□□□ -0.49
UPK2O00526 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UPK2O00526 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12□□□□□ -0.49
UPK2O00526 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
UPK2O00526 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12□□□□□ -0.49
UPK2O00526 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
UPK2O00526 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
UPK2O00526 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12□□□□□ -0.49
UPK2O00526 BEND3P1-201ENST00000421591 1944 ntBASIC12□□□□□ -0.49
UPK2O00526 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12□□□□□ -0.49
UPK2O00526 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 EIF3FP3-201ENST00000434851 1086 ntBASIC12□□□□□ -0.49
UPK2O00526 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12□□□□□ -0.49
UPK2O00526 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12□□□□□ -0.49
UPK2O00526 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
UPK2O00526 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12□□□□□ -0.49
UPK2O00526 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12□□□□□ -0.49
UPK2O00526 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12□□□□□ -0.49
UPK2O00526 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12□□□□□ -0.49
UPK2O00526 AP005019.2-201ENST00000615104 511 ntBASIC12□□□□□ -0.49
UPK2O00526 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12□□□□□ -0.49
UPK2O00526 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK2O00526 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms