Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 STRN-202ENST00000379213 2254 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 AC113367.3-201ENST00000508316 1912 ntBASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 WASH3P-207ENST00000560956 1394 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 FO538757.1-201ENST00000623083 1397 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ANGEL1-201ENST00000251089 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 GEMIN4-207ENST00000576778 4729 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 HNRNPRP1-201ENST00000453465 1695 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 LINC00638-201ENST00000555578 2518 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AP002414.1-201ENST00000391405 1147 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 NABP1-203ENST00000409510 843 ntTSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC068472.1-201ENST00000474589 881 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC034232.1-201ENST00000506026 1064 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC083906.2-201ENST00000511578 360 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AL138781.1-201ENST00000566567 1274 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TEN1-204ENST00000588202 862 ntTSL 3 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AC023090.2-201ENST00000625182 2110 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms