Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 ECM1P1-201ENST00000604092 1279 ntBASIC13.17□□□□□ -0.3
NPIPB4C9JG80 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPB4C9JG80 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AC006001.1-201ENST00000325130 474 ntBASIC13.16□□□□□ -0.3
NPIPB4C9JG80 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 KRT43P-201ENST00000434019 910 ntBASIC13.16□□□□□ -0.3
NPIPB4C9JG80 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AP003171.2-201ENST00000528208 925 ntBASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 MIR3197-201ENST00000582241 73 ntBASIC13.16□□□□□ -0.3
NPIPB4C9JG80 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPB4C9JG80 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 AC016397.2-201ENST00000624848 1985 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 COX5BP8-201ENST00000416911 349 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 RN7SL713P-201ENST00000582127 302 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 OR10B1P-201ENST00000601666 907 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 ZACNP1-201ENST00000612259 710 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 AC002472.3-201ENST00000640124 621 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 AC009093.2-202ENST00000620513 2079 ntBASIC13.15□□□□□ -0.3
NPIPB4C9JG80 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPB4C9JG80 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms