Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 LINC00554-201ENST00000564841 3011 ntBASIC10.66□□□□□ -0.7
LYRM9A8MSI8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 RN7SKP175-201ENST00000408472 289 ntBASIC10.66□□□□□ -0.7
LYRM9A8MSI8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 AL391280.1-201ENST00000506969 1062 ntBASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 MIR6775-201ENST00000617557 69 ntBASIC10.66□□□□□ -0.7
LYRM9A8MSI8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LYRM9A8MSI8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 AC011840.2-201ENST00000563063 1520 ntBASIC10.65□□□□□ -0.7
LYRM9A8MSI8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 RN7SKP230-201ENST00000365642 335 ntBASIC10.65□□□□□ -0.7
LYRM9A8MSI8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 AC004945.1-201ENST00000416738 983 ntBASIC10.65□□□□□ -0.7
LYRM9A8MSI8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 HLA-V-201ENST00000429037 534 ntBASIC10.65□□□□□ -0.7
LYRM9A8MSI8 CSF2RBP1-201ENST00000447905 391 ntBASIC10.65□□□□□ -0.7
LYRM9A8MSI8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 GCOM2-201ENST00000509133 1104 ntBASIC10.65□□□□□ -0.7
LYRM9A8MSI8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYRM9A8MSI8 RNA5SP412-201ENST00000516234 123 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms