Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL4A3BPQ9Y5P4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 ACTBP11-201ENST00000436287 1126 ntBASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 RPL13AP20-201ENST00000459725 609 ntBASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 RN7SL560P-201ENST00000577943 264 ntBASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL4A3BPQ9Y5P4 MTHFR-210ENST00000641407 2387 ntBASIC16.71■□□□□ 0.26
COL4A3BPQ9Y5P4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
COL4A3BPQ9Y5P4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 AL136379.1-201ENST00000623471 2642 ntBASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 BRWD1P1-201ENST00000401091 371 ntBASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 FAM8A4P-201ENST00000435433 1213 ntBASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 AC004466.1-201ENST00000599515 1080 ntBASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COL4A3BPQ9Y5P4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms