Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB7Q9Y5E2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB7Q9Y5E2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
PCDHB7Q9Y5E2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB7Q9Y5E2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
PCDHB7Q9Y5E2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PCDHB7Q9Y5E2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 IQSEC3P1-201ENST00000538799 536 ntBASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 AC026803.1-201ENST00000569130 274 ntBASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 AC103810.10-201ENST00000606504 343 ntBASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 FAM90A2P-201ENST00000511144 1395 ntBASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 FAM90A25P-201ENST00000528404 1395 ntBASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB7Q9Y5E2 FRMPD2B-201ENST00000431305 1347 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC026320.2-201ENST00000434379 478 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC018635.2-201ENST00000608625 364 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC073352.2-201ENST00000609385 439 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 COX6A1P2-201ENST00000620597 330 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 CYP4F23P-201ENST00000593402 1579 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 SSR4P1-203ENST00000599569 2260 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 AC092978.1-202ENST00000637590 1327 ntBASIC15.94■□□□□ 0.14
PCDHB7Q9Y5E2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB7Q9Y5E2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHB7Q9Y5E2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms