Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 FAM58DP-201ENST00000428076 619 ntBASIC13.71□□□□□ -0.21
CLN6Q9NWW5 CEND1P1-201ENST00000451006 455 ntBASIC13.71□□□□□ -0.21
CLN6Q9NWW5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 ALG1L5P-201ENST00000482043 771 ntBASIC13.71□□□□□ -0.21
CLN6Q9NWW5 PGAM5P1-201ENST00000518923 814 ntBASIC13.71□□□□□ -0.21
CLN6Q9NWW5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLN6Q9NWW5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 AC090505.1-201ENST00000430515 1834 ntBASIC13.71□□□□□ -0.22
CLN6Q9NWW5 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLN6Q9NWW5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 AL627223.1-201ENST00000416693 442 ntBASIC13.7□□□□□ -0.22
CLN6Q9NWW5 MTND6P24-201ENST00000440466 518 ntBASIC13.7□□□□□ -0.22
CLN6Q9NWW5 TMEM198B-204ENST00000484016 896 ntBASIC13.7□□□□□ -0.22
CLN6Q9NWW5 AC004066.1-201ENST00000502488 802 ntBASIC13.7□□□□□ -0.22
CLN6Q9NWW5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.7□□□□□ -0.22
CLN6Q9NWW5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLN6Q9NWW5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CLN6Q9NWW5 TCAM1P-207ENST00000485295 1537 ntBASIC13.69□□□□□ -0.22
CLN6Q9NWW5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLN6Q9NWW5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLN6Q9NWW5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms