Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MCCD1P2-201ENST00000423228 335 ntBASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AL592309.1-201ENST00000443127 649 ntBASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C12orf4Q9NQ89 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 C20orf181-201ENST00000623918 480 ntBASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 FP325330.2-201ENST00000624219 5630 ntBASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms