Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ABCD1P4-201ENST00000399687 604 ntBASIC23.79■■□□□ 1.4
IFT140Q96RY7 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC053503.3-201ENST00000448375 114 ntBASIC23.79■■□□□ 1.4
IFT140Q96RY7 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 NALT1-202ENST00000450304 437 ntTSL 3 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 AL137244.1-201ENST00000422931 865 ntBASIC23.78■■□□□ 1.4
IFT140Q96RY7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 AC091304.3-201ENST00000566500 716 ntBASIC23.78■■□□□ 1.4
IFT140Q96RY7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IFT140Q96RY7 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC23.78■■□□□ 1.4
IFT140Q96RY7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 HNRNPA1P21-201ENST00000424115 961 ntBASIC23.77■■□□□ 1.4
IFT140Q96RY7 AC011431.1-201ENST00000512971 230 ntBASIC23.77■■□□□ 1.4
IFT140Q96RY7 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 AC126365.1-201ENST00000578585 1514 ntBASIC23.77■■□□□ 1.4
IFT140Q96RY7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
IFT140Q96RY7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC23.77■■□□□ 1.4
IFT140Q96RY7 AP005117.1-202ENST00000581724 1908 ntBASIC23.77■■□□□ 1.4
IFT140Q96RY7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
IFT140Q96RY7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IFT140Q96RY7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 FAU-201ENST00000279259 461 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 OLA1P2-201ENST00000395519 1264 ntBASIC23.76■■□□□ 1.39
IFT140Q96RY7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 ACY3-202ENST00000529256 933 ntTSL 3 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IFT140Q96RY7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 FAM226B-201ENST00000602508 1490 ntBASIC23.76■■□□□ 1.39
IFT140Q96RY7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
IFT140Q96RY7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC23.76■■□□□ 1.39
IFT140Q96RY7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
IFT140Q96RY7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IFT140Q96RY7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC23.75■■□□□ 1.39
IFT140Q96RY7 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms