Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 UXT-AS1-201ENST00000590504 1525 ntBASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 DMBT1P1-203ENST00000636837 4628 ntBASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 BEND3P3-201ENST00000611030 2440 ntBASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC026120.1-201ENST00000611536 926 ntBASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AC111170.3-201ENST00000624282 2464 ntBASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AL139385.1-201ENST00000611744 3272 ntBASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP6Q96FZ7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC118758.2-201ENST00000614242 2813 ntBASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms