Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.75□□□□□ -0.37
USP9XQ93008 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
USP9XQ93008 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.75□□□□□ -0.37
USP9XQ93008 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 AC023090.2-201ENST00000625182 2110 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 VENTXP4-201ENST00000449029 958 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.75□□□□□ -0.37
USP9XQ93008 AC092896.1-201ENST00000465850 380 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.75□□□□□ -0.37
USP9XQ93008 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.75□□□□□ -0.37
USP9XQ93008 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.75□□□□□ -0.37
USP9XQ93008 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.75□□□□□ -0.37
USP9XQ93008 ZBED1P1-201ENST00000502364 1930 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
USP9XQ93008 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
USP9XQ93008 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 AC098934.1-203ENST00000442868 1262 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.75□□□□□ -0.37
USP9XQ93008 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC12.75□□□□□ -0.37
USP9XQ93008 MIR6893-201ENST00000613458 69 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.75□□□□□ -0.37
USP9XQ93008 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
USP9XQ93008 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
USP9XQ93008 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.74□□□□□ -0.37
USP9XQ93008 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 ALG1L3P-201ENST00000503331 765 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 KRT8P1-201ENST00000557533 1207 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 AL118522.1-201ENST00000611368 560 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 AC105250.1-201ENST00000509378 2057 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
USP9XQ93008 AC012508.2-201ENST00000567613 1472 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.74□□□□□ -0.37
USP9XQ93008 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
USP9XQ93008 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
USP9XQ93008 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms