Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AC105129.2-201ENST00000559536 390 ntBASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 AC106872.11-201ENST00000605838 421 ntBASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 AC126755.1-201ENST00000525846 6405 ntBASIC14.03□□□□□ -0.16
SLC38A9Q8NBW4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 MBLAC2-202ENST00000514906 1936 ntBASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SLC38A9Q8NBW4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 ACTG1P2-201ENST00000415776 1125 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 ACTG1P11-201ENST00000425411 1125 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 VDAC1P1-201ENST00000439229 848 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 CICP12-201ENST00000455801 843 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 MARK2P5-201ENST00000507649 634 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 AL160314.3-201ENST00000556041 767 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SLC38A9Q8NBW4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AC008132.1-202ENST00000342005 1389 ntBASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AL008718.2-201ENST00000609206 1313 ntBASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AC136759.1-202ENST00000530858 2194 ntBASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 RN7SL11P-201ENST00000471305 293 ntBASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 HLA-J-204ENST00000495278 958 ntBASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SLC38A9Q8NBW4 AC091544.8-201ENST00000619490 361 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms