Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 AL109954.1-202ENST00000564051 2148 ntBASIC16.27■□□□□ 0.19
VPS52Q8N1B4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AC127383.1-201ENST00000444697 1800 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AC022616.1-201ENST00000518688 554 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 SAMD11P1-201ENST00000571429 661 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 RN7SL713P-201ENST00000582127 302 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AC007663.3-201ENST00000609632 465 ntBASIC16.26■□□□□ 0.19
VPS52Q8N1B4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VPS52Q8N1B4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AL662890.1-201ENST00000396818 632 ntBASIC16.25■□□□□ 0.19
VPS52Q8N1B4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 POM121L8P-201ENST00000417732 1281 ntBASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 POM121L9P-203ENST00000441984 1285 ntBASIC16.25■□□□□ 0.19
VPS52Q8N1B4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AC006486.2-201ENST00000624246 2199 ntBASIC16.25■□□□□ 0.19
VPS52Q8N1B4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AC138035.3-201ENST00000622706 2791 ntBASIC16.25■□□□□ 0.19
VPS52Q8N1B4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms