Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PACS2Q86VP3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.2■□□□□ 0.02
PACS2Q86VP3 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PACS2Q86VP3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PACS2Q86VP3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PACS2Q86VP3 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PACS2Q86VP3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 PSMC1P2-201ENST00000423961 1204 ntBASIC15.19■□□□□ 0.02
PACS2Q86VP3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 KRT18P34-201ENST00000488218 1270 ntBASIC15.19■□□□□ 0.02
PACS2Q86VP3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 AC020765.3-201ENST00000613051 740 ntBASIC15.19■□□□□ 0.02
PACS2Q86VP3 AL513210.1-201ENST00000629608 234 ntBASIC15.19■□□□□ 0.02
PACS2Q86VP3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PACS2Q86VP3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.19■□□□□ 0.02
PACS2Q86VP3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 ADH5P3-201ENST00000433842 1137 ntBASIC15.18■□□□□ 0.02
PACS2Q86VP3 SDR42E1P3-201ENST00000438345 502 ntBASIC15.18■□□□□ 0.02
PACS2Q86VP3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 IGHV3-62-201ENST00000520057 340 ntBASIC15.18■□□□□ 0.02
PACS2Q86VP3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.18■□□□□ 0.02
PACS2Q86VP3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PACS2Q86VP3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms