Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 PTENP1-202ENST00000532280 3996 ntBASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRFAM7AQ494W8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRFAM7AQ494W8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 TUBB1P2-201ENST00000422712 1306 ntBASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 TUBB1P1-201ENST00000503144 1300 ntBASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ANKRD19P-201ENST00000338192 862 ntBASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 MIR1908-201ENST00000410394 80 ntBASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 SPDYE17-201ENST00000412399 783 ntBASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRFAM7AQ494W8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 AL136982.4-201ENST00000437689 1740 ntBASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 AC004945.1-201ENST00000416738 983 ntBASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 AL589987.1-201ENST00000453380 819 ntBASIC13.19□□□□□ -0.3
CHRFAM7AQ494W8 AL139010.1-201ENST00000454878 894 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms