Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 AC023908.3-201ENST00000564211 3047 ntBASIC19.32■□□□□ 0.68
CCDC27Q2M243 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 AC015818.8-201ENST00000587907 1519 ntBASIC19.31■□□□□ 0.68
CCDC27Q2M243 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 FLJ16779-201ENST00000612722 7638 ntBASIC19.31■□□□□ 0.68
CCDC27Q2M243 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC27Q2M243 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC27Q2M243 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 AL354877.1-201ENST00000424412 413 ntBASIC19.3■□□□□ 0.68
CCDC27Q2M243 FAM21FP-201ENST00000426241 1131 ntBASIC19.3■□□□□ 0.68
CCDC27Q2M243 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 MIR4741-201ENST00000579822 90 ntBASIC19.3■□□□□ 0.68
CCDC27Q2M243 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC27Q2M243 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC27Q2M243 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms