Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
YBX1P67809 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YBX1P67809 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
YBX1P67809 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.56□□□□□ -0.08
YBX1P67809 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 FO681548.1-201ENST00000455617 1132 ntBASIC14.56□□□□□ -0.08
YBX1P67809 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 RAB43P1-201ENST00000561790 589 ntBASIC14.56□□□□□ -0.08
YBX1P67809 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ECM1P1-201ENST00000604092 1279 ntBASIC14.56□□□□□ -0.08
YBX1P67809 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.56□□□□□ -0.08
YBX1P67809 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 INE2-201ENST00000630399 1874 ntBASIC14.56□□□□□ -0.08
YBX1P67809 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 AC152010.1-201ENST00000415779 2006 ntBASIC14.56□□□□□ -0.08
YBX1P67809 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YBX1P67809 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
YBX1P67809 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.56□□□□□ -0.08
YBX1P67809 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
YBX1P67809 AC016694.1-201ENST00000434179 700 ntBASIC14.55□□□□□ -0.08
YBX1P67809 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.55□□□□□ -0.08
YBX1P67809 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.55□□□□□ -0.08
YBX1P67809 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 AC078819.1-201ENST00000547454 765 ntBASIC14.55□□□□□ -0.08
YBX1P67809 AC012085.1-201ENST00000548270 765 ntBASIC14.55□□□□□ -0.08
YBX1P67809 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.55□□□□□ -0.08
YBX1P67809 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms