Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KRT8P24-201ENST00000560290 1559 ntBASIC13.1□□□□□ -0.31
GDNFP39905 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.09□□□□□ -0.31
GDNFP39905 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
GDNFP39905 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.09□□□□□ -0.31
GDNFP39905 SPDYE17-201ENST00000412399 783 ntBASIC13.09□□□□□ -0.31
GDNFP39905 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.09□□□□□ -0.31
GDNFP39905 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.09□□□□□ -0.31
GDNFP39905 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 AL079307.3-201ENST00000556114 283 ntBASIC13.09□□□□□ -0.31
GDNFP39905 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.09□□□□□ -0.31
GDNFP39905 AL589739.1-201ENST00000607720 493 ntBASIC13.09□□□□□ -0.31
GDNFP39905 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 SPDYE12P-201ENST00000618416 771 ntBASIC13.09□□□□□ -0.31
GDNFP39905 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 TUBB3P1-201ENST00000405796 1332 ntBASIC13.09□□□□□ -0.31
GDNFP39905 KRT18P28-201ENST00000453838 1332 ntBASIC13.09□□□□□ -0.31
GDNFP39905 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.09□□□□□ -0.31
GDNFP39905 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.09□□□□□ -0.31
GDNFP39905 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GDNFP39905 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.08□□□□□ -0.31
GDNFP39905 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.08□□□□□ -0.31
GDNFP39905 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
GDNFP39905 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
GDNFP39905 AL035456.1-201ENST00000456064 1369 ntBASIC13.08□□□□□ -0.31
GDNFP39905 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 AC131212.3-201ENST00000624087 4219 ntBASIC13.08□□□□□ -0.32
GDNFP39905 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.08□□□□□ -0.32
GDNFP39905 AL031595.1-201ENST00000623969 4709 ntBASIC13.08□□□□□ -0.32
GDNFP39905 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
GDNFP39905 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GDNFP39905 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms