Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC2P35250 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC2P35250 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC2P35250 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 RNA5SP359-201ENST00000364838 113 ntBASIC16.03■□□□□ 0.16
RFC2P35250 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC2P35250 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 AC092638.2-201ENST00000441105 947 ntBASIC16.03■□□□□ 0.16
RFC2P35250 LYPLA2P1-203ENST00000447689 696 ntBASIC16.03■□□□□ 0.16
RFC2P35250 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC2P35250 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC2P35250 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFC2P35250 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RFC2P35250 AL161773.1-201ENST00000624845 863 ntBASIC16.03■□□□□ 0.16
RFC2P35250 AP001184.1-201ENST00000637936 376 ntBASIC16.03■□□□□ 0.16
RFC2P35250 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RFC2P35250 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC2P35250 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.03■□□□□ 0.16
RFC2P35250 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RFC2P35250 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC2P35250 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC2P35250 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC2P35250 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
RFC2P35250 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RFC2P35250 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC2P35250 ORAOV1P1-201ENST00000503108 395 ntBASIC16.02■□□□□ 0.16
RFC2P35250 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC2P35250 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC2P35250 AC005357.2-202ENST00000590507 1060 ntBASIC16.02■□□□□ 0.16
RFC2P35250 AC105137.3-201ENST00000617588 984 ntBASIC16.02■□□□□ 0.16
RFC2P35250 AC023090.2-201ENST00000625182 2110 ntBASIC16.02■□□□□ 0.16
RFC2P35250 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC2P35250 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC2P35250 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
RFC2P35250 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC2P35250 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
RFC2P35250 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC2P35250 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC2P35250 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC2P35250 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC2P35250 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC2P35250 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC2P35250 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC2P35250 AC104640.1-201ENST00000562617 2109 ntBASIC16.01■□□□□ 0.15
RFC2P35250 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC2P35250 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC2P35250 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC2P35250 AL359258.3-201ENST00000622910 2331 ntBASIC16.01■□□□□ 0.15
RFC2P35250 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RFC2P35250 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms